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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938210.1_cds_XP_016483186.1_74329
CDS Infomation

[gene=LOC107803906] [db_xref=GeneID:107803906] [protein=regulator of nonsense transcripts 1 homolog isoform X2] [protein_id=XP_016483186.1] [location=complement(join(23923..24063,24288..24386,24575..24706,24890..24961,25041..25103,25192..25562,26182..26299,26386..26460,26809..26943,27192..27269,27346..27444,28079..28192,28412..28567,29896..29982))] [gbkey=CDS]
Sequence

ATGTGCAAGAAAGCTGCTCGTGCTGGACTTGCTCAATCTCTGTTTGAACGCCTTGTTTTG
CTGGGAGTGAAGCCAATTAGGTTGCAGGTACAATACCGTATGCATCCTGCACTTTCGGAG
TTTCCCTCAAATAGCTTTTATGAAGGTACTCTTCAAAATGGTGTAACCATCAACGAGAGG
CAATCATTAGGCATTGATTTTCCTTGGCCTGTACCCAACCGTCCCATGTTCTTTTATGTC
CAGATGGGACAAGAGGAGATAAGTGCTAGTGGAACTTCCTATCTAAATAGAACAGAAGCG
GCCAACGTTGAAAAGATAGTGACTACATTCCTCAAGAGTGGTGTAGTCCCTAGTCAGATT
GGAGTTATAACACCATATGAGGGTCAACGAGCATACATCGTAAATTACATGTCTAGAAAT
GGTGCTTTAAGGCAGCAGCTTTACAAGGAAATTGAGGTTGCAAGTGTAGATTCATTTCAA
GGAAGGGAAAAAGATTATATCATTTTGTCTTGCGTCAGGAGCAATGAACATCAGGGTATC
GGGTTTCTTAATGATCCTCGCAGGCTTAATGTTGCTCTTACACGTGCTCGTTATGGAATT
GTTATTTTAGGAAATCCTAAAGTTTTGAGCAAGCAGCCTCTCTGGAATGGCTTGTTGAAA
CATTACAAGGAGCATGAATGCTTGGTAGAAGGTCCTTTAAATAACTTAAAACAAAGCATG
GTTCAGTTTCAGAAGCCAAAAAAGATCTACAATGACCGCAGGCTTTTCTTTGGTGGTGGA
CCTGGAATAGTTCCTGGTGATAATTATGGATCTGCTGCCTCGACAAACCCCAATGCTGAC
AGGCGGAATAGTCGTTCTAGGGGTTCTTACATGGCACCTGGTCCACCCAATGGTACTCAG
AGACCCGGTGTCTATCCTTCTGGTTATCCAATGCCTCGAGTTCCCGCCTCTCCTTACCAC
AGTGGCTCTTCCCAACCGTATGCAATTCCTACTCGTGGTGCTATACACGGGCCTGTTGGA
GCTGTTCCTCATGGTCCACAGCCAGGTGGCCAGGGTTTTGGGGCTGGGCGTGGGAATGCC
AATGCTCCAATTGGTAGCCATCTTTCTCACCAGCAAGCCTCCCAGCAACCTATTGGAAGT
CATGGGCCTAACTTCAACTTTCCTGCACTTGAAAATCCGAACACTCAGCCATCAGTTGGA
GGACCTTTATCTCAGCCTGGATATGCTTCTAATATGGCCGTTCAAGGACCAAGCCAGACA
TTTCGTGATGGATTTTCAATGGGTGGCATGTCACAGGACTTCTTGGGAGATGATTTCAAG
AGCCAGGGATCCCATGTTCCATATAATGTTGCTGACTTCTCTACACAGGCTTCTCAAAGC
GGATTTGCTGTCGATTATGTAAATCAGGGAGCACAGGCTGGTTTTCCAGGAAATTTTTTG
ATCCAGAATTCACAAGCTGGATACTCACGTTTCGGTTCAGGAAATGAATTTATGTCACAG
GATTACATGGCTCATGGATCCCAAGGTCTCTTCACACAAGCTGGATACAATGATCCATCA
CAGGATGACAGTTCACAAAACCATTTTAGCATGTCCAATAGTTTACTCAATCCACTGTAC
TCCCAGCCTTTTGCTCCCTACAACACCCAACCGTTGCACATGCAAAGTTCCCAACCTCAT
CAACCGCAAGCCCCACAAGTCCAAGGCTCACAAAATCAGAAACTCCATTACAACGGTTAA

Peptide Sequence

PEP ID

XP_016483186.1
PEP Infomation

PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2 [Nicotiana tabacum]
Sequence

MCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTINER
QSLGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQI
GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGI
GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLKHYKEHECLVEGPLNNLKQSM
VQFQKPKKIYNDRRLFFGGGPGIVPGDNYGSAASTNPNADRRNSRSRGSYMAPGPPNGTQ
RPGVYPSGYPMPRVPASPYHSGSSQPYAIPTRGAIHGPVGAVPHGPQPGGQGFGAGRGNA
NAPIGSHLSHQQASQQPIGSHGPNFNFPALENPNTQPSVGGPLSQPGYASNMAVQGPSQT
FRDGFSMGGMSQDFLGDDFKSQGSHVPYNVADFSTQASQSGFAVDYVNQGAQAGFPGNFL
IQNSQAGYSRFGSGNEFMSQDYMAHGSQGLFTQAGYNDPSQDDSSQNHFSMSNSLLNPLY
SQPFAPYNTQPLHMQSSQPHQPQAPQVQGSQNQKLHYNG

Transcript Sequence

Gene sequence data has not been registered.